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metabolomics-workbench-database

8.7

by davila7

142Favorites
304Upvotes
0Downvotes

Access NIH Metabolomics Workbench via REST API (4,200+ studies). Query metabolites, RefMet nomenclature, MS/NMR data, m/z searches, study metadata, for metabolomics and biomarker discovery.

metabolomics

8.7

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0

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Data & Analytics

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Quick Review

Excellent skill for metabolomics research. The description clearly conveys the skill's purpose (accessing NIH Metabolomics Workbench with 4,200+ studies). SKILL.md provides comprehensive coverage with 6 well-documented core capabilities, practical Python code examples, and 3 realistic workflows. The structure is logical with an overview, capability sections, workflows, and best practices. References to api_reference.md for detailed specifications keep the main file focused. This is a highly novel skill - querying specialized metabolomics databases with proper nomenclature standardization (RefMet), m/z searches with adduct specifications, and multi-parameter filtering would require substantial domain knowledge and many tokens for a CLI agent to accomplish independently. Minor improvement possible: slightly more explicit guidance on error handling and rate limits. Overall, this is a well-designed, domain-specific skill that meaningfully reduces complexity for metabolomics researchers.

LLM Signals

Description coverage9
Task knowledge10
Structure9
Novelty9

GitHub Signals

18,073
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Last commit 0 days ago

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davila7

davila7

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