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reactome-database

8.7

by davila7

85Favorites
280Upvotes
0Downvotes

Query Reactome REST API for pathway analysis, enrichment, gene-pathway mapping, disease pathways, molecular interactions, expression analysis, for systems biology studies.

bioinformatics

8.7

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0

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Data & Analytics

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Quick Review

Excellent bioinformatics skill for Reactome pathway analysis. The description clearly explains when and how to use the skill for pathway enrichment, gene mapping, and expression analysis. Comprehensive task knowledge with detailed code examples for both REST API and Python client approaches, covering overrepresentation analysis, expression data analysis, visualization, and token management. Well-structured with clear sections and appropriate references to external files (api_reference.md, reactome_query.py). High novelty as pathway analysis via Reactome REST API would require significant tokens and domain expertise for a CLI agent to implement from scratch - this skill packages complex bioinformatics workflows efficiently. Minor improvement possible in explicitly listing all helper script commands, but overall this is a high-quality, production-ready skill.

LLM Signals

Description coverage9
Task knowledge10
Structure9
Novelty8

GitHub Signals

18,073
1,635
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Last commit 0 days ago

Publisher

davila7

davila7

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