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scikit-bio

8.3

by K-Dense-AI

109Favorites
433Upvotes
0Downvotes

Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.

bioinformatics

8.3

Rating

0

Installs

Data & Analytics

Category

Quick Review

Excellent bioinformatics skill with comprehensive coverage of scikit-bio capabilities. The SKILL.md provides detailed, well-organized documentation across 10 core capability areas with practical code examples for each. The description clearly articulates when to use the skill, and the extensive code patterns enable a CLI agent to invoke functionality confidently. Task knowledge is outstanding, covering sequence analysis, alignments, phylogenetics, diversity metrics, ordination, statistical testing, and file I/O with sufficient detail for implementation. Structure is logical with clear section delineation and cross-references to API documentation. The skill addresses a genuinely complex domain (bioinformatics/microbiome analysis) that would require significant tokens for a CLI agent to implement from scratch, making it highly novel and cost-effective. Minor room for improvement in making some technical concepts even more accessible to non-specialists, but overall this is a high-quality, production-ready skill.

LLM Signals

Description coverage9
Task knowledge10
Structure9
Novelty9

GitHub Signals

6,871
818
49
3
Last commit 1 days ago

Publisher

K-Dense-AI

K-Dense-AI

Skill Author

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K-Dense-AI

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